Menu Expand
Molybdenum and Tungsten Enzymes

Molybdenum and Tungsten Enzymes

Russ Hille | Carola Schulzke | Martin L Kirk

(2016)

Additional Information

Book Details

Abstract

There has been enormous progress in our understanding of molybdenum and tungsten enzymes and relevant inorganic complexes of molybdenum and tungsten over the past twenty years. This set of three books provides a timely and comprehensive overview of the field and documents the latest research.

Building on the first volume that focussed on biochemistry aspects, the second volume in the set focusses on the inorganic complexes that model the structures and reactivity of the active sites of each major group of molybdenum and tungsten enzymes. Special attention is given to synthetic strategies, reaction mechanism and chemical kinetics of these systems. The introductory chapter provides a useful overview and places the topic of the book into a wider context.

This text will be a valuable reference to workers both inside and outside the field, including graduate students and young investigators interested in developing new research programs in this area.


This book is edited by Professor Russ Hille (University of California, Riverside), Professor Carola Schulzke (University of Greifswald) and Professor Martin Kirk (University of New Mexico) who have over 275 publications ad over 65 years of experience between them in the field. Their complementary expertise in molybdenum containing enzymes, bioinorganic chemistry and the physical inorganic chemistry of molybdenum complexes and enzymes, respectively, allow the authoritative and comprehensive coverage demonstrated in this book.


Table of Contents

Section Title Page Action Price
Cover Cover
Molybdenum and Tungsten Enzymes Bioinorganic Chemistry i
Preface v
Dedication vii
Contents ix
Chapter 1 - An Overview of the Synthetic Strategies, Reaction Mechanisms and Kinetics of Model Compounds Relevant to Molybdenum- and Tungsten-Containing Enzymes 1
Introduction and Overview 1
Chapter 2 - Pterin-Inspired Model Compounds of Molybdenum Enzymes 8
2.1 Introduction 8
2.2 Unveiling the Pterin Component of Moco 10
2.2.1 The Pterin is Discovered 10
2.3 Development of Pterin-Inspired Models 15
2.3.1 First-Generation Models 15
2.3.1.1 Models Where Molybdenum is Coordinated Directly to Pterins 15
2.3.1.2 Model Exploration of Redox Processes Between Mo and Pterin 18
2.3.1.2.1\rPterin Redox Chemistry.Participation in redox processes is one of the fundamental roles of pteridines in biology, and pterins mo... 18
2.3.1.2.2\rPterin-Molybdenum Redox Chemistry.The early studies focused on Mo(vi) and tetrahydropterin reagents to closely mimic the Mo and ... 20
2.3.1.2.3\rReactivity of Molybdenum Complexes of Reduced Pterins.To reconcile the contradictory Mo and pterin oxidation state assignments, ... 23
2.3.1.2.4\rDMSO Reduction.Model compounds for the molybdenum cofactor are often developed to be capable of mimicking biological activity.2c... 24
2.3.1.2.5\rMolybdenum(iv) Reactions with Oxidized Pterins.Long before a pteridine was discovered in Moco, the reaction of Mo(iv) and flavin... 27
2.3.1.2.6\rFormal Oxidation States in Molybdenum–Pterin Complexes.These molybdenum–pterin complexes share a theme: all complexes provide ev... 30
2.3.1.2.7\rEvidence for the Non-innocent Nature of Pterin Ligands.The sum of experimental and computational results emphasizes that the ele... 32
2.3.2 Second-Generation Dithiolene Pterins and their Complexes 33
2.3.2.1 Synthesis of Mo-Dithiolene Complexes in Reactions of Alkynes and Metal Polysulfides 34
2.3.2.2 Synthesis of Dithiolene Ligands and Complexes from Protected Dithiolene Precursors 36
2.3.2.3 Synthesis of Sulfur-Containing Pterin Molecules 42
2.3.2.3.1\rChemical Synthesis of the Moco Metabolite Urothione.In 1982, Johnson and Rajagopalan published10 their seminal paper proposing t... 42
2.3.2.3.2\rSynthesis of Pterin Dithiolene Ligand.In 1971, Hartzler communicated that an ylide can be formed by reacting an activated alkyne... 43
2.3.3 Third-Generation Dithiolene Pterins and their Complexes 43
2.3.3.1 A Route to a Synthetic Pyranopterin Leads to Molybdopterin in Protected Form 44
2.3.3.2 A Retrosynthetic Analysis Approach 47
2.3.3.3 Spontaneous Pyran Ring Cyclization Within a Pterin Dithiolene Complex 48
2.3.3.4 Determining the Redox State of the Pyranopterin System 49
2.3.4 Chemical Behavior of Dithiolenes Substituted by Pterin and N-Heterocycles 53
2.4 Unresolved Questions and Current Objectives 57
Acknowledgement 59
References 59
Chapter 3 - Electron Transfer Mechanisms in Molybdenum and Tungsten Model Compounds 68
3.1 Introduction to Molybdenum and Tungsten 68
3.1.1 Role in Biology 69
3.2 Model Systems 70
3.3 Electron Transfer in Molybdoenzymes 78
3.3.1 Principle Involved in Electron Transfer Reactions 80
3.4 Conclusion 87
References 88
Chapter 4 - Comparative Kinetics of Enzymes and Models 94
4.1 Active Sites of Molybdenum and Tungsten Enzymes 94
4.2 General Remarks on Michaelis–Menten Kinetics 96
4.2.1 Determination of Michaelis–Menten Parameters 100
4.2.2 Michaelis–Menten Kinetics for Oxygen Transfer Reactions – “Quo Vadis” 103
4.3 Kinetic Aspects of Oxygen Transfer Reactions – Enzymes vs. Models 106
4.3.1 Oxygen Transfer Reactions Mediated by Enzymes 106
4.3.2 Studying Half-Reactions of Model Complexes 107
4.3.3 Selected Historical Steps in Functional Model Development 116
4.3.4 Half-Reaction Kinetics Applied to a Two-Substrate Catalytic Cycle – A Simulation 121
4.4 Dedication and Acknowledgements 124
References 125
Chapter 5 - Synthetic Models of the Nitrogenase Clusters 130
5.1 Introduction 130
5.2 The Nitrogenase Metalloclusters: A Synthetic Perspective 131
5.2.1 The F-Cluster 132
5.2.2 The P-Cluster 132
5.2.3 The FeMo-Cofactor 133
5.3 Synthetic Considerations 134
5.4 F-Cluster Analogues: The All-Ferrous State 136
5.5 Modeling the Nitrogenase Superclusters 137
5.5.1 Heterometallic Cores 137
5.5.2 Topological Analogues 141
5.5.2.1 Higher Nuclearities and Sulfur-Voided Cubanes 141
5.5.2.2 All-Sulfide PN-Type Cores 144
5.5.2.3 Neutral Octanuclear Clusters 146
5.5.3 Heteroligated Cores 148
5.5.3.1 Oxide–Sulfide Cores 150
5.5.3.2 Imide–Sulfide Cores 151
5.6 Cluster Assembly Mechanisms: Chalcogen-Labeled Cores 154
5.7 Status and Prospects 158
Abbreviations 158
Acknowledgements 159
References 159
Chapter 6 - Synthesis of Mono- and Bisdithiolene Molybdenum and Tungsten Model Compounds 166
6.1 Introduction 166
6.2 Model Compounds for the DMSOR Family 169
6.2.1 The MoVIO2 and MoIVO Couple 170
6.2.2 The MoVIO and MoIV Couple 176
6.2.3 MoVIS(Se-R) and MoIVS Couple 181
6.3 Model Compounds for the Sulfite Oxidase Family 182
6.4 Model Compounds for the Xanthine Oxidase Family 183
6.5 W-substituted Model Compounds for the DMSOR and Xanthine Oxidase Families 185
6.6 Model Compounds for Tungsten-Dependent Enzymes 186
6.6.1 The WVIO(S) Center 186
6.6.2 The WVIS(Se-R) Center 188
6.6.3 The WVI(CO/CN)(SR) Center 189
6.6.4 The Unidentified W Center 189
6.7 Conclusion 190
References 190
Chapter 7 - Models for the Xanthine Oxidase Family of Enzymes 194
7.1 Introduction 194
7.2 Molybdenum Hydroxylases 195
7.2.1 Overview of the Enzymes 195
7.2.2 Key Discoveries Informing Model Studies 196
7.2.3 Active Sites and Model Targets 199
7.3 Active Site Components: Synthetic Background 200
7.3.1 General Challenges 200
7.3.2 The Chalcogenido Components: Background, Synthetic Approaches and Reagents 201
7.3.2.1 Oxosulfido- and Oxoselenido-Mo(vi) Species 201
7.3.2.1.1\rSynthetic Strategy 1: Oxo to Sulfido/Selenido Ligand Conversions.The OSCR is a conceptually simple strategy for the synthesis of... 202
7.3.2.1.2\rSynthetic Strategy 2: Atom Transfer Methodologies.Bidirectional OAT reactions capable of inter-converting dioxo-Mo(vi) and oxo-M... 204
7.3.2.2 Hydrosulfido-Mo Species 206
7.3.2.3 µ-Sulfido Bridged Oxo–Mo–Cu Complexes 206
7.3.3 The Mono(dithiolene) Component: Background and Synthetic Approaches 207
7.3.3.1 Dithiolene Complexes 207
7.3.3.2 Strategies for the Synthesis of Mono(dithiolene) Complexes 208
7.3.4 Maintaining Mononuclearity Post-Synthesis 209
7.4 Molybdenum Hydroxylase Models 211
7.4.1 Models of Enzymes Containing Oxosulfido and Oxoselenido Active Sites 211
7.4.1.1 Models of Oxidized Enzymes 211
7.4.1.1.1\rThiomolybdates.Thiomolybdates are included in our discussion not because they are MoHMs per se but because they are historically... 211
7.4.1.1.2\rPseudo-Tetrahedral Oxosulfido-Mo(vi) Complexes.The first mono 212
7.4.1.1.3\rOxosulfido-Mo(vi) Scorpionate Complexes.Scorpionate lig 213
7.4.1.1.4\rOther Oxosulfido-Mo(vi) Hard-Donor Complexes.The first octahedral, oxosulfido-Mo(vi) complexes to contain an “unperturbed” termi... 217
7.4.1.1.5\rDithiolene Complexes.Currently, there are no models combining the oxosulfido-Mo(vi) and mono(dithiolene) components of Mo hydrox... 218
7.4.1.2 Models of Reduced Enzymes 219
7.4.1.2.1\rOxosulfido- and Oxo(hydrosulfido)-Mo(v) Compounds.Only a handful of mononuclear, EPR-active oxosulfido- and oxo(hydrosulfido)-Mo... 219
7.4.1.2.2\rOxo(hydrosulfido)-Mo(iv) Complexes.The reactions of NBun4 222
7.4.2 Models for the MoO(µ-S)Cu Active Site of CODH 223
7.4.2.1 Oxo-di-µ-sulfido-MoVICuI Dithiolene Complexes 223
7.4.2.2 Oxo-µ-Sulfido-MoVCuI Scorpionate Complexes 224
7.5 Conclusion 226
Dedication and Acknowledgements 227
References 228
Subject Index 239